STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV26948.1Glycine betaine/proline transport system ATP-binding protein. (407 aa)    
Predicted Functional Partners:
SFV26952.1
Glycine betaine/proline transport system permease protein.
 
  0.981
SFV26946.1
Glycine betaine/proline transport system substrate-binding protein.
 
  0.970
SFV32060.1
Glycine betaine/proline transport system permease protein.
  0.952
SFV29750.1
Glycine betaine/proline transport system substrate-binding protein.
  
  0.922
SFV38675.1
Glycine betaine/proline transport system substrate-binding protein.
  
  0.921
SFV32056.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.920
SFV32862.1
Glycine betaine/proline transport system permease protein.
  
  0.920
SFV37131.1
Glycine betaine/proline transport system permease protein.
 
  0.920
SFV38687.1
Glycine betaine/proline transport system permease protein.
 
  0.920
SFV29757.1
Glycine betaine/proline transport system permease protein.
  
  0.919
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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