Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFV27418.1 | SFV37508.1 | SAMN04488557_0755 | SAMN04488557_3198 | Protein-S-isoprenylcysteine O-methyltransferase Ste14. | Peptidase family M23. | 0.424 |
SFV27418.1 | SFV39031.1 | SAMN04488557_0755 | SAMN04488557_4054 | Protein-S-isoprenylcysteine O-methyltransferase Ste14. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.651 |
SFV27418.1 | htpX | SAMN04488557_0755 | SAMN04488557_3489 | Protein-S-isoprenylcysteine O-methyltransferase Ste14. | Heat shock protein. Metallo peptidase. MEROPS family M48B; Belongs to the peptidase M48B family. | 0.405 |
SFV27418.1 | trmL | SAMN04488557_0755 | SAMN04488557_0756 | Protein-S-isoprenylcysteine O-methyltransferase Ste14. | tRNA (cytidine/uridine-2'-O-)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | 0.565 |
SFV37508.1 | SFV27418.1 | SAMN04488557_3198 | SAMN04488557_0755 | Peptidase family M23. | Protein-S-isoprenylcysteine O-methyltransferase Ste14. | 0.424 |
SFV39031.1 | SFV27418.1 | SAMN04488557_4054 | SAMN04488557_0755 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Protein-S-isoprenylcysteine O-methyltransferase Ste14. | 0.651 |
htpX | SFV27418.1 | SAMN04488557_3489 | SAMN04488557_0755 | Heat shock protein. Metallo peptidase. MEROPS family M48B; Belongs to the peptidase M48B family. | Protein-S-isoprenylcysteine O-methyltransferase Ste14. | 0.405 |
trmL | SFV27418.1 | SAMN04488557_0756 | SAMN04488557_0755 | tRNA (cytidine/uridine-2'-O-)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | Protein-S-isoprenylcysteine O-methyltransferase Ste14. | 0.565 |