STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV27500.1Hypothetical protein. (355 aa)    
Predicted Functional Partners:
SFV38568.1
Hypothetical protein.
  
     0.767
SFV25725.1
Hypothetical protein.
  
     0.760
SFV33065.1
Sporulation related domain-containing protein.
  
     0.755
SFV38095.1
Hypothetical protein.
  
     0.752
SFV28160.1
Protein of unknown function.
  
     0.745
SFV38553.1
Hypothetical protein.
  
     0.741
SFV36715.1
Porin.
  
     0.736
SFV39159.1
Hypothetical protein.
  
     0.734
SFV38551.1
Porin.
  
     0.733
SFV25726.1
Membrane carboxypeptidase (penicillin-binding protein).
  
     0.731
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.