Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFV27800.1 | SFV27804.1 | SAMN04488557_0849 | SAMN04488557_0850 | Cell division protein ZapA. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.566 |
SFV27800.1 | SFV27808.1 | SAMN04488557_0849 | SAMN04488557_0851 | Cell division protein ZapA. | Hypothetical protein. | 0.466 |
SFV27804.1 | SFV27800.1 | SAMN04488557_0850 | SAMN04488557_0849 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Cell division protein ZapA. | 0.566 |
SFV27804.1 | SFV27808.1 | SAMN04488557_0850 | SAMN04488557_0851 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Hypothetical protein. | 0.793 |
SFV27804.1 | SFV27812.1 | SAMN04488557_0850 | SAMN04488557_0852 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | DNA-binding regulatory protein, YebC/PmpR family. | 0.566 |
SFV27804.1 | folD-2 | SAMN04488557_0850 | SAMN04488557_3205 | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.948 |
SFV27808.1 | SFV27800.1 | SAMN04488557_0851 | SAMN04488557_0849 | Hypothetical protein. | Cell division protein ZapA. | 0.466 |
SFV27808.1 | SFV27804.1 | SAMN04488557_0851 | SAMN04488557_0850 | Hypothetical protein. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.793 |
SFV27808.1 | SFV27812.1 | SAMN04488557_0851 | SAMN04488557_0852 | Hypothetical protein. | DNA-binding regulatory protein, YebC/PmpR family. | 0.584 |
SFV27808.1 | folD-2 | SAMN04488557_0851 | SAMN04488557_3205 | Hypothetical protein. | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.419 |
SFV27812.1 | SFV27804.1 | SAMN04488557_0852 | SAMN04488557_0850 | DNA-binding regulatory protein, YebC/PmpR family. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.566 |
SFV27812.1 | SFV27808.1 | SAMN04488557_0852 | SAMN04488557_0851 | DNA-binding regulatory protein, YebC/PmpR family. | Hypothetical protein. | 0.584 |
folD-2 | SFV27804.1 | SAMN04488557_3205 | SAMN04488557_0850 | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.948 |
folD-2 | SFV27808.1 | SAMN04488557_3205 | SAMN04488557_0851 | Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Hypothetical protein. | 0.419 |