STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV28216.1Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. (128 aa)    
Predicted Functional Partners:
SFV39017.1
NifU homolog involved in Fe-S cluster formation.
  
  
 0.972
SFV28177.1
Iron-regulated ABC transporter membrane component SufB.
  
 
 0.912
SFV25868.1
DnaJ like chaperone protein.
  
 
 0.904
SFV38564.1
Ferredoxin, 2Fe-2S.
 
 
 0.900
SFV28172.1
Transcriptional regulator, BadM/Rrf2 family.
 
  
 0.894
SFV29151.1
Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.889
SFV28189.1
Fe-S cluster assembly ATP-binding protein.
  
 
 0.885
SFV28203.1
Iron-regulated ABC transporter permease protein SufD.
  
 
 0.861
SFV26126.1
HEAT repeat.
    
 
 0.789
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.765
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.