STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV28284.1Protein of unknown function. (289 aa)    
Predicted Functional Partners:
SFV25716.1
TIGR02302 family protein.
  
     0.744
SFV26195.1
Hypothetical protein.
  
     0.734
SFV37802.1
Protein of unknown function.
  
     0.713
SFV27500.1
Hypothetical protein.
  
     0.710
SFV26237.1
Protein of unknown function.
  
     0.700
lptD
LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.663
SFV38514.1
Invasion protein IalB, involved in pathogenesis.
  
     0.647
SFV27609.1
Hypothetical protein.
  
     0.643
SFV25860.1
Uncharacterized conserved protein, contains Zn-finger domain.
  
     0.639
SFV28045.1
N-terminal double-transmembrane domain-containing protein.
  
     0.633
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.