Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFV29339.1 | SFV32302.1 | SAMN04488557_1227 | SAMN04488557_1552 | Acetolactate synthase, small subunit. | Homoserine dehydrogenase. | 0.928 |
SFV29339.1 | SFV32314.1 | SAMN04488557_1227 | SAMN04488557_1556 | Acetolactate synthase, small subunit. | O-acetylhomoserine sulfhydrylase. | 0.519 |
SFV29339.1 | SFV36892.1 | SAMN04488557_1227 | SAMN04488557_2877 | Acetolactate synthase, small subunit. | Threonine synthase. | 0.716 |
SFV29339.1 | asd | SAMN04488557_1227 | SAMN04488557_3314 | Acetolactate synthase, small subunit. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.735 |
SFV29339.1 | dapA | SAMN04488557_1227 | SAMN04488557_1039 | Acetolactate synthase, small subunit. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.508 |
SFV29339.1 | metXA | SAMN04488557_1227 | SAMN04488557_2755 | Acetolactate synthase, small subunit. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.501 |
SFV29339.1 | metZ | SAMN04488557_1227 | SAMN04488557_0043 | Acetolactate synthase, small subunit. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.496 |
SFV32302.1 | SFV29339.1 | SAMN04488557_1552 | SAMN04488557_1227 | Homoserine dehydrogenase. | Acetolactate synthase, small subunit. | 0.928 |
SFV32302.1 | SFV32305.1 | SAMN04488557_1552 | SAMN04488557_1553 | Homoserine dehydrogenase. | Alanine-synthesizing transaminase. | 0.917 |
SFV32302.1 | SFV32314.1 | SAMN04488557_1552 | SAMN04488557_1556 | Homoserine dehydrogenase. | O-acetylhomoserine sulfhydrylase. | 0.918 |
SFV32302.1 | SFV36892.1 | SAMN04488557_1552 | SAMN04488557_2877 | Homoserine dehydrogenase. | Threonine synthase. | 0.992 |
SFV32302.1 | SFV38233.1 | SAMN04488557_1552 | SAMN04488557_3642 | Homoserine dehydrogenase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.946 |
SFV32302.1 | asd | SAMN04488557_1552 | SAMN04488557_3314 | Homoserine dehydrogenase. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.984 |
SFV32302.1 | dapA | SAMN04488557_1552 | SAMN04488557_1039 | Homoserine dehydrogenase. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.921 |
SFV32302.1 | metXA | SAMN04488557_1552 | SAMN04488557_2755 | Homoserine dehydrogenase. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.968 |
SFV32302.1 | metZ | SAMN04488557_1552 | SAMN04488557_0043 | Homoserine dehydrogenase. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.931 |
SFV32302.1 | thrB | SAMN04488557_1552 | SAMN04488557_2869 | Homoserine dehydrogenase. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.952 |
SFV32305.1 | SFV32302.1 | SAMN04488557_1553 | SAMN04488557_1552 | Alanine-synthesizing transaminase. | Homoserine dehydrogenase. | 0.917 |
SFV32305.1 | SFV38233.1 | SAMN04488557_1553 | SAMN04488557_3642 | Alanine-synthesizing transaminase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.446 |
SFV32305.1 | dapA | SAMN04488557_1553 | SAMN04488557_1039 | Alanine-synthesizing transaminase. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.531 |
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