STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV32613.1Protein of unknown function. (86 aa)    
Predicted Functional Partners:
SFV25860.1
Uncharacterized conserved protein, contains Zn-finger domain.
  
     0.698
SFV39023.1
Predicted transglutaminase-like cysteine proteinase.
  
     0.696
SFV27609.1
Hypothetical protein.
  
     0.694
SFV36901.1
Invasion protein IalB, involved in pathogenesis.
  
     0.629
ctaA
Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.
       0.606
SFV37392.1
Protein of unknown function.
  
     0.605
SFV26815.1
Uncharacterized membrane protein.
  
     0.595
SFV31907.1
Hypothetical protein.
  
     0.587
SFV31995.1
Hypothetical protein.
  
     0.560
SFV34637.1
Invasion protein IalB, involved in pathogenesis.
  
     0.543
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.