STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV32811.1Putative spermidine/putrescine transport system permease protein. (285 aa)    
Predicted Functional Partners:
SFV32816.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.947
SFV34466.1
Spermidine/putrescine transport system permease protein.
 
  0.932
SFV25808.1
Spermidine/putrescine transport system permease protein.
 
  0.918
SFV34266.1
Spermidine/putrescine transport system permease protein.
 
  0.909
SFV32813.1
Putative spermidine/putrescine transport system permease protein.
 
 
0.906
SFV35366.1
Spermidine/putrescine transport system permease protein.
 
  0.857
SFV25810.1
Spermidine/putrescine transport system substrate-binding protein.
 
 
  0.835
SFV34259.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.834
SFV34480.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.828
SFV35400.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.827
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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