STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV33434.14-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family. (327 aa)    
Predicted Functional Partners:
SFV33433.1
Putative hydrolase of the HAD superfamily.
 
    0.949
SFV33431.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
 
     0.936
SFV33430.1
Hypothetical protein.
       0.773
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
  0.771
SFV26982.1
FAD/FMN-containing dehydrogenase.
    
 0.708
SFV35477.1
Glycolate oxidase FAD binding subunit.
    
 0.708
SFV35480.1
Glycolate oxidase.
    
 0.708
SFV37535.1
FAD/FMN-containing dehydrogenase.
    
 0.708
SFV33436.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
    0.654
SFV36864.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.620
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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