Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFV29604.1 | SFV33450.1 | SAMN04488557_1289 | SAMN04488557_1995 | General secretion pathway protein H. | Type II secretion system protein D (GspD). | 0.765 |
SFV29604.1 | SFV33458.1 | SAMN04488557_1289 | SAMN04488557_1999 | General secretion pathway protein H. | General secretion pathway protein G. | 0.507 |
SFV29604.1 | SFV33462.1 | SAMN04488557_1289 | SAMN04488557_2001 | General secretion pathway protein H. | N-terminal methylation site-containing protein. | 0.710 |
SFV29604.1 | SFV33464.1 | SAMN04488557_1289 | SAMN04488557_2002 | General secretion pathway protein H. | General secretion pathway protein J. | 0.733 |
SFV29604.1 | SFV33466.1 | SAMN04488557_1289 | SAMN04488557_2003 | General secretion pathway protein H. | Type II secretion system protein K (GspK). | 0.775 |
SFV29604.1 | SFV33468.1 | SAMN04488557_1289 | SAMN04488557_2004 | General secretion pathway protein H. | General secretion pathway protein L. | 0.783 |
SFV29604.1 | SFV33470.1 | SAMN04488557_1289 | SAMN04488557_2005 | General secretion pathway protein H. | General secretion pathway protein M. | 0.763 |
SFV29604.1 | SFV36982.1 | SAMN04488557_1289 | SAMN04488557_2933 | General secretion pathway protein H. | Fimbrial assembly protein (PilN). | 0.793 |
SFV33450.1 | SFV29604.1 | SAMN04488557_1995 | SAMN04488557_1289 | Type II secretion system protein D (GspD). | General secretion pathway protein H. | 0.765 |
SFV33450.1 | SFV33458.1 | SAMN04488557_1995 | SAMN04488557_1999 | Type II secretion system protein D (GspD). | General secretion pathway protein G. | 0.832 |
SFV33450.1 | SFV33460.1 | SAMN04488557_1995 | SAMN04488557_2000 | Type II secretion system protein D (GspD). | Type II secretion system protein H (GspH). | 0.792 |
SFV33450.1 | SFV33462.1 | SAMN04488557_1995 | SAMN04488557_2001 | Type II secretion system protein D (GspD). | N-terminal methylation site-containing protein. | 0.562 |
SFV33450.1 | SFV33464.1 | SAMN04488557_1995 | SAMN04488557_2002 | Type II secretion system protein D (GspD). | General secretion pathway protein J. | 0.658 |
SFV33450.1 | SFV33466.1 | SAMN04488557_1995 | SAMN04488557_2003 | Type II secretion system protein D (GspD). | Type II secretion system protein K (GspK). | 0.789 |
SFV33450.1 | SFV33468.1 | SAMN04488557_1995 | SAMN04488557_2004 | Type II secretion system protein D (GspD). | General secretion pathway protein L. | 0.819 |
SFV33450.1 | SFV33470.1 | SAMN04488557_1995 | SAMN04488557_2005 | Type II secretion system protein D (GspD). | General secretion pathway protein M. | 0.742 |
SFV33450.1 | SFV36963.1 | SAMN04488557_1995 | SAMN04488557_2923 | Type II secretion system protein D (GspD). | General secretion pathway protein H. | 0.749 |
SFV33450.1 | SFV36982.1 | SAMN04488557_1995 | SAMN04488557_2933 | Type II secretion system protein D (GspD). | Fimbrial assembly protein (PilN). | 0.781 |
SFV33458.1 | SFV29604.1 | SAMN04488557_1999 | SAMN04488557_1289 | General secretion pathway protein G. | General secretion pathway protein H. | 0.507 |
SFV33458.1 | SFV33450.1 | SAMN04488557_1999 | SAMN04488557_1995 | General secretion pathway protein G. | Type II secretion system protein D (GspD). | 0.832 |
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