STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV33724.1Formate dehydrogenase (quinone-dependent) catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (811 aa)    
Predicted Functional Partners:
SFV33727.1
Formate dehydrogenase (quinone-dependent) iron-sulfur subunit.
 
 0.999
SFV33720.1
Formate dehydrogenase (quinone-dependent) catalytic subunit.
  
  0.995
SFV33731.1
Formate dehydrogenase subunit gamma.
 
 0.992
SFV33734.1
Tat proofreading chaperone FdhE; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
 
 
 0.965
SFV31878.1
Elongation factor Tu C-terminal domain-containing protein.
   
 
 0.813
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.813
SFV34316.1
Reductase C-terminal.
  
 
 0.808
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
  
 0.798
SFV27426.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.790
SFV38609.1
Formylmethanofuran dehydrogenase, subunit A.
   
 0.745
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.