STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV33913.1Conserved hypothetical protein. (270 aa)    
Predicted Functional Partners:
SFV38553.1
Hypothetical protein.
  
     0.662
SFV38551.1
Porin.
  
     0.657
SFV36715.1
Porin.
  
     0.638
SFV25725.1
Hypothetical protein.
  
     0.634
SFV39159.1
Hypothetical protein.
  
     0.625
SFV26627.1
Hypothetical protein.
  
     0.620
SFV25822.1
Hypothetical protein.
  
     0.608
SFV25726.1
Membrane carboxypeptidase (penicillin-binding protein).
  
     0.607
SFV39009.1
Hypothetical protein.
  
     0.599
SFV36882.1
Hypothetical protein.
  
     0.595
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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