STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV33945.1N-acetylmuramoyl-L-alanine amidase. (434 aa)    
Predicted Functional Partners:
SFV34797.1
N-acetylmuramoyl-L-alanine amidase.
  
  
 
0.860
SFV37699.1
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
    
   0.770
SFV28248.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
   
 0.726
SFV38527.1
Sporulation related domain-containing protein.
  
 0.537
SFV28573.1
Soluble lytic murein transglycosylase.
 
  
 0.460
SFV38218.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
 
   
 0.456
SFV33933.1
Small-conductance mechanosensitive channel.
 
     0.454
SFV33937.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.453
SFV33940.1
Molybdopterin synthase sulfur carrier subunit.
       0.453
SFV33943.1
Molybdopterin synthase catalytic subunit.
       0.453
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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