Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFV32359.1 | SFV34202.1 | SAMN04488557_1571 | SAMN04488557_2251 | Putative Mg2+ transporter-C (MgtC) family protein. | Mg2+-importing ATPase. | 0.684 |
SFV33371.1 | SFV34202.1 | SAMN04488557_1951 | SAMN04488557_2251 | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | Mg2+-importing ATPase. | 0.534 |
SFV33371.1 | SFV37766.1 | SAMN04488557_1951 | SAMN04488557_3328 | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | Zn-dependent protease (includes SpoIVFB). | 0.464 |
SFV33371.1 | adk | SAMN04488557_1951 | SAMN04488557_1604 | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.402 |
SFV33371.1 | atpD | SAMN04488557_1951 | SAMN04488557_3408 | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.497 |
SFV33371.1 | atpE | SAMN04488557_1951 | SAMN04488557_2864 | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.591 |
SFV33371.1 | atpH | SAMN04488557_1951 | SAMN04488557_3404 | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.597 |
SFV34199.1 | SFV34202.1 | SAMN04488557_2250 | SAMN04488557_2251 | Hypothetical protein. | Mg2+-importing ATPase. | 0.520 |
SFV34202.1 | SFV32359.1 | SAMN04488557_2251 | SAMN04488557_1571 | Mg2+-importing ATPase. | Putative Mg2+ transporter-C (MgtC) family protein. | 0.684 |
SFV34202.1 | SFV33371.1 | SAMN04488557_2251 | SAMN04488557_1951 | Mg2+-importing ATPase. | Natural product biosynthesis luciferase-like monooxygenase domain-containing protein. | 0.534 |
SFV34202.1 | SFV34199.1 | SAMN04488557_2251 | SAMN04488557_2250 | Mg2+-importing ATPase. | Hypothetical protein. | 0.520 |
SFV34202.1 | SFV34215.1 | SAMN04488557_2251 | SAMN04488557_2255 | Mg2+-importing ATPase. | Hypothetical protein. | 0.720 |
SFV34202.1 | SFV37766.1 | SAMN04488557_2251 | SAMN04488557_3328 | Mg2+-importing ATPase. | Zn-dependent protease (includes SpoIVFB). | 0.567 |
SFV34202.1 | SFV38818.1 | SAMN04488557_2251 | SAMN04488557_3865 | Mg2+-importing ATPase. | Sulfite reductase (NADPH) flavoprotein alpha-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. | 0.825 |
SFV34202.1 | adk | SAMN04488557_2251 | SAMN04488557_1604 | Mg2+-importing ATPase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.526 |
SFV34202.1 | atpD | SAMN04488557_2251 | SAMN04488557_3408 | Mg2+-importing ATPase. | ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.571 |
SFV34202.1 | atpE | SAMN04488557_2251 | SAMN04488557_2864 | Mg2+-importing ATPase. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.742 |
SFV34202.1 | atpH | SAMN04488557_2251 | SAMN04488557_3404 | Mg2+-importing ATPase. | ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.537 |
SFV34215.1 | SFV34202.1 | SAMN04488557_2255 | SAMN04488557_2251 | Hypothetical protein. | Mg2+-importing ATPase. | 0.720 |
SFV34215.1 | SFV37766.1 | SAMN04488557_2255 | SAMN04488557_3328 | Hypothetical protein. | Zn-dependent protease (includes SpoIVFB). | 0.463 |
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