STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV34297.1Uncharacterized membrane protein HdeD, DUF308 family. (189 aa)    
Predicted Functional Partners:
SFV36744.1
Uncharacterized membrane protein HdeD, DUF308 family.
  
     0.765
SFV32359.1
Putative Mg2+ transporter-C (MgtC) family protein.
  
  
 0.638
SFV34300.1
Hypothetical protein.
       0.511
SFV32293.1
Hypothetical protein.
  
     0.496
SFV28088.1
Arylsulfatase.
  
     0.494
SFV25818.1
Haloacid dehalogenase-like hydrolase.
  
     0.493
SFV33221.1
Arylsulfatase.
  
     0.476
SFV27500.1
Hypothetical protein.
  
     0.443
SFV35708.1
Protein TonB.
  
     0.433
SFV37853.1
Penicillin amidase Cysteine peptidase. MEROPS family C59.
  
    0.407
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.