STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV34313.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (114 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 
 0.782
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
    
 0.751
SFV38044.1
Allosteric NADP-dependent malic enzyme.
    
 0.676
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
     
 0.625
SFV39154.1
Urea carboxylase.
   
 
 0.606
SFV34316.1
Reductase C-terminal.
    
 0.578
SFV27578.1
Ferredoxin-NADP reductase.
    
 0.570
SFV26726.1
Glutamate synthase (NADH) small subunit.
  
 0.565
SFV36731.1
Hypothetical protein.
  
 
 0.550
SFV32066.1
Ferredoxin-NADP reductase.
    
 0.535
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.