STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV34579.1Putative colanic acid biosynthesis acetyltransferase WcaF. (198 aa)    
Predicted Functional Partners:
SFV34582.1
Poly(glycerol-phosphate) alpha-glucosyltransferase.
 
    0.874
SFV34575.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.844
SFV34586.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.784
SFV34589.1
Hypothetical protein.
       0.730
SFV33371.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
 
   
 0.679
SFV34592.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.630
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
 0.618
SFV34595.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.577
SFV34598.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.577
SFV32743.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
  
 0.571
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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