STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV34609.1Capsular exopolysaccharide family. (760 aa)    
Predicted Functional Partners:
SFV32743.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.999
SFV34569.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.999
SFV33378.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.998
SFV38621.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
 
 0.998
SFV34612.1
Polysaccharide export outer membrane protein.
 
 0.995
SFV32755.1
Polysaccharide export outer membrane protein.
 
 0.987
SFV32622.1
Polysaccharide export outer membrane protein.
 
 0.978
SFV30135.1
Exopolysaccharide production protein ExoF.
 
 0.977
SFV29934.1
Polysaccharide biosynthesis/export protein.
 
 0.958
SFV34604.1
Hypothetical protein.
 
     0.951
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.