STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV34806.1Putative Zn-dependent protease, contains TPR repeats. (469 aa)    
Predicted Functional Partners:
SFV38218.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
 
 
   0.865
SFV32649.1
Signal transduction histidine kinase.
    
 0.832
SFV34810.1
Protein-disulfide isomerase.
 
    0.753
SFV28443.1
Response regulator receiver domain-containing protein.
    
 0.681
SFV32581.1
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II.
    
  0.643
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.643
SFV36707.1
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II.
    
  0.643
SFV36712.1
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
    
  0.643
SFV30069.1
PAS domain S-box-containing protein.
     
 0.625
SFV38976.1
Peptidyl-prolyl cis-trans isomerase SurA.
 
  
 0.603
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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