STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV35257.1Hopanoid biosynthesis associated radical SAM protein HpnJ. (474 aa)    
Predicted Functional Partners:
SFV35253.1
Ceramide glucosyltransferase.
 
   
 0.943
SFV33759.1
Hopanoid biosynthesis associated protein HpnK.
 
   
 0.826
SFV33755.1
Ceramide glucosyltransferase.
 
   
 0.783
SFV33751.1
Putative membrane protein.
 
    0.777
SFV35299.1
Dihydroflavonol-4-reductase.
  
  
  0.768
SFV35269.1
Hopanoid biosynthesis associated radical SAM protein HpnH.
 
  
 0.761
SFV35278.1
Squalene-hopene/tetraprenyl-beta-curcumene cyclase.
 
   
 0.733
SFV35295.1
Hopene-associated glycosyltransferase HpnB.
 
     0.732
SFV35273.1
Hopanoid-associated phosphorylase.
 
   
 0.673
SFV35260.1
Hypothetical protein.
 
     0.618
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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