STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV35600.1Hypothetical protein. (244 aa)    
Predicted Functional Partners:
SFV36679.1
Hypothetical protein.
  
   
 0.778
lysS
lysyl-tRNA synthetase, class I; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.774
SFV37626.1
Predicted lipid-binding transport protein, Tim44 family.
  
     0.730
SFV26825.1
Uncharacterized conserved protein, UPF0335 family; Belongs to the UPF0335 family.
  
   
 0.716
SFV37581.1
DNA polymerase III, delta subunit.
  
     0.712
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.672
SFV36864.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
   
    0.666
SFV37983.1
SH3-like domain-containing protein.
  
     0.647
yidC
Protein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
     0.645
SFV38017.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.637
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.