STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV36726.1Glycerol-3-phosphate dehydrogenase. (459 aa)    
Predicted Functional Partners:
SFV36727.1
Thioredoxin reductase.
 
  0.983
SFV36728.1
Glycerol kinase; Belongs to the FGGY kinase family.
 
  
 0.935
SFV29504.1
Thioredoxin reductase.
  
  0.860
SFV38044.1
Allosteric NADP-dependent malic enzyme.
  
 
 0.777
SFV26728.1
Glutamate synthase (NADH) large subunit.
  
 
 0.765
SFV37965.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.656
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.641
SFV39154.1
Urea carboxylase.
   
 
  0.627
SFV36729.1
Luciferase family oxidoreductase, group 1.
       0.570
SFV36730.1
Oxidoreductase molybdopterin binding domain-containing protein.
       0.570
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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