STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV36828.1Thioredoxin-like. (170 aa)    
Predicted Functional Partners:
SFV30163.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
   
  0.899
SFV38459.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
  0.899
SFV33421.1
Putative collagen-binding domain of a collagenase.
   
  0.872
SFV32137.1
Hypothetical protein.
    
   0.703
SFV32290.1
Protein of unknown function.
    
   0.703
SFV33375.1
Hypothetical protein.
    
   0.703
SFV37227.1
Chemotaxis protein MotC.
    
   0.703
SFV39101.1
Protein of unknown function.
    
   0.703
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
  
  
  0.674
SFV38692.1
Trypsin.
  
     0.626
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.