STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV36928.12TM domain-containing protein. (71 aa)    
Predicted Functional Partners:
SFV36930.1
Hypothetical protein.
       0.506
SFV38113.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
     0.499
SFV25725.1
Hypothetical protein.
  
     0.487
SFV26499.1
Tetratricopeptide repeat-containing protein.
    
 0.457
SFV25726.1
Membrane carboxypeptidase (penicillin-binding protein).
  
     0.438
SFV36926.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.425
SFV36924.1
Hydrophobe/amphiphile efflux-1 (HAE1) family protein.
       0.422
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.