Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFV29303.1 | SFV29583.1 | SAMN04488557_1218 | SAMN04488557_1285 | LysM domain-containing protein. | General secretion pathway protein L. | 0.426 |
SFV29303.1 | SFV29617.1 | SAMN04488557_1218 | SAMN04488557_1292 | LysM domain-containing protein. | General secretion pathway protein E. | 0.402 |
SFV29303.1 | SFV33454.1 | SAMN04488557_1218 | SAMN04488557_1997 | LysM domain-containing protein. | General secretion pathway protein E. | 0.402 |
SFV29303.1 | SFV33468.1 | SAMN04488557_1218 | SAMN04488557_2004 | LysM domain-containing protein. | General secretion pathway protein L. | 0.426 |
SFV29303.1 | SFV36982.1 | SAMN04488557_1218 | SAMN04488557_2933 | LysM domain-containing protein. | Fimbrial assembly protein (PilN). | 0.799 |
SFV29303.1 | SFV36996.1 | SAMN04488557_1218 | SAMN04488557_2940 | LysM domain-containing protein. | Type II secretion system protein E (GspE). | 0.402 |
SFV29303.1 | SFV37356.1 | SAMN04488557_1218 | SAMN04488557_3121 | LysM domain-containing protein. | General secretion pathway protein L. | 0.426 |
SFV29303.1 | SFV37370.1 | SAMN04488557_1218 | SAMN04488557_3128 | LysM domain-containing protein. | General secretion pathway protein E. | 0.402 |
SFV29583.1 | SFV29303.1 | SAMN04488557_1285 | SAMN04488557_1218 | General secretion pathway protein L. | LysM domain-containing protein. | 0.426 |
SFV29583.1 | SFV29604.1 | SAMN04488557_1285 | SAMN04488557_1289 | General secretion pathway protein L. | General secretion pathway protein H. | 0.922 |
SFV29583.1 | SFV29617.1 | SAMN04488557_1285 | SAMN04488557_1292 | General secretion pathway protein L. | General secretion pathway protein E. | 0.753 |
SFV29583.1 | SFV33454.1 | SAMN04488557_1285 | SAMN04488557_1997 | General secretion pathway protein L. | General secretion pathway protein E. | 0.474 |
SFV29583.1 | SFV33460.1 | SAMN04488557_1285 | SAMN04488557_2000 | General secretion pathway protein L. | Type II secretion system protein H (GspH). | 0.751 |
SFV29583.1 | SFV36982.1 | SAMN04488557_1285 | SAMN04488557_2933 | General secretion pathway protein L. | Fimbrial assembly protein (PilN). | 0.986 |
SFV29583.1 | SFV36996.1 | SAMN04488557_1285 | SAMN04488557_2940 | General secretion pathway protein L. | Type II secretion system protein E (GspE). | 0.474 |
SFV29583.1 | SFV37370.1 | SAMN04488557_1285 | SAMN04488557_3128 | General secretion pathway protein L. | General secretion pathway protein E. | 0.474 |
SFV29604.1 | SFV29583.1 | SAMN04488557_1289 | SAMN04488557_1285 | General secretion pathway protein H. | General secretion pathway protein L. | 0.922 |
SFV29604.1 | SFV29617.1 | SAMN04488557_1289 | SAMN04488557_1292 | General secretion pathway protein H. | General secretion pathway protein E. | 0.689 |
SFV29604.1 | SFV33468.1 | SAMN04488557_1289 | SAMN04488557_2004 | General secretion pathway protein H. | General secretion pathway protein L. | 0.783 |
SFV29604.1 | SFV36982.1 | SAMN04488557_1289 | SAMN04488557_2933 | General secretion pathway protein H. | Fimbrial assembly protein (PilN). | 0.793 |
page 1 of 4