STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV37294.1Gamma-glutamylmethylamide synthetase; Belongs to the glutamine synthetase family. (435 aa)    
Predicted Functional Partners:
SFV37288.1
Glutamate synthase domain-containing protein 1.
 
 
 0.898
SFV37290.1
Glutamate synthase domain-containing protein 3.
 
 
 0.892
SFV26728.1
Glutamate synthase (NADH) large subunit.
  
 
 0.885
SFV37292.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
 
 
  0.877
SFV32787.1
Glutamate synthase domain-containing protein 1.
 
 
 0.781
SFV32783.1
Glutamate synthase domain-containing protein 3.
 
 
 0.761
SFV32781.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
 
 
  0.737
SFV39154.1
Urea carboxylase.
   
 0.735
SFV28241.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.661
SFV34316.1
Reductase C-terminal.
  
 
 0.617
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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