STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV37372.1General secretion pathway protein D; Belongs to the bacterial secretin family. (772 aa)    
Predicted Functional Partners:
SFV36982.1
Fimbrial assembly protein (PilN).
 
   
 0.781
SFV29609.1
General secretion pathway protein G.
 
  
 0.777
SFV33458.1
General secretion pathway protein G.
 
  
 0.776
SFV37366.1
Type II secretion system protein G (GspG).
  
 0.776
SFV36986.1
General secretion pathway protein G.
 
  
 0.775
SFV37356.1
General secretion pathway protein L.
 
  
 0.768
SFV33468.1
General secretion pathway protein L.
 
  
 0.767
SFV29604.1
General secretion pathway protein H.
 
     0.764
SFV36970.1
General secretion pathway protein K.
 
   
 0.763
SFV36992.1
General secretion pathway protein H.
 
     0.762
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.