Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFV37647.1 | SFV37651.1 | SAMN04488557_3269 | SAMN04488557_3271 | Protein of unknown function. | Hypothetical protein. | 0.494 |
SFV37647.1 | SFV38075.1 | SAMN04488557_3269 | SAMN04488557_3487 | Protein of unknown function. | Uncharacterized conserved protein, heparinase superfamily. | 0.538 |
SFV37651.1 | SFV37647.1 | SAMN04488557_3271 | SAMN04488557_3269 | Hypothetical protein. | Protein of unknown function. | 0.494 |
SFV37651.1 | SFV37653.1 | SAMN04488557_3271 | SAMN04488557_3272 | Hypothetical protein. | Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.504 |
SFV37651.1 | SFV38036.1 | SAMN04488557_3271 | SAMN04488557_3466 | Hypothetical protein. | Nucleotide-binding universal stress protein, UspA family. | 0.407 |
SFV37651.1 | SFV38075.1 | SAMN04488557_3271 | SAMN04488557_3487 | Hypothetical protein. | Uncharacterized conserved protein, heparinase superfamily. | 0.479 |
SFV37651.1 | SFV38200.1 | SAMN04488557_3271 | SAMN04488557_3607 | Hypothetical protein. | Signal transduction histidine kinase. | 0.595 |
SFV37651.1 | ccmA | SAMN04488557_3271 | SAMN04488557_3273 | Hypothetical protein. | Heme exporter protein A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.457 |
SFV37653.1 | SFV37651.1 | SAMN04488557_3272 | SAMN04488557_3271 | Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Hypothetical protein. | 0.504 |
SFV37653.1 | ccmA | SAMN04488557_3272 | SAMN04488557_3273 | Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Heme exporter protein A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.570 |
SFV38036.1 | SFV37651.1 | SAMN04488557_3466 | SAMN04488557_3271 | Nucleotide-binding universal stress protein, UspA family. | Hypothetical protein. | 0.407 |
SFV38036.1 | SFV38200.1 | SAMN04488557_3466 | SAMN04488557_3607 | Nucleotide-binding universal stress protein, UspA family. | Signal transduction histidine kinase. | 0.461 |
SFV38075.1 | SFV37647.1 | SAMN04488557_3487 | SAMN04488557_3269 | Uncharacterized conserved protein, heparinase superfamily. | Protein of unknown function. | 0.538 |
SFV38075.1 | SFV37651.1 | SAMN04488557_3487 | SAMN04488557_3271 | Uncharacterized conserved protein, heparinase superfamily. | Hypothetical protein. | 0.479 |
SFV38200.1 | SFV37651.1 | SAMN04488557_3607 | SAMN04488557_3271 | Signal transduction histidine kinase. | Hypothetical protein. | 0.595 |
SFV38200.1 | SFV38036.1 | SAMN04488557_3607 | SAMN04488557_3466 | Signal transduction histidine kinase. | Nucleotide-binding universal stress protein, UspA family. | 0.461 |
ccmA | SFV37651.1 | SAMN04488557_3273 | SAMN04488557_3271 | Heme exporter protein A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Hypothetical protein. | 0.457 |
ccmA | SFV37653.1 | SAMN04488557_3273 | SAMN04488557_3272 | Heme exporter protein A; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.570 |