STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV37672.1Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. (299 aa)    
Predicted Functional Partners:
mdcB
triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
 
  
 0.844
SFV37042.1
Malonate decarboxylase delta subunit.
  
 
 0.828
SFV37674.1
L-erythro-3-methylmalyl-CoA dehydratase.
 
 
 0.828
SFV27458.1
L-fuculose 1-phosphate aldolase.
  
    0.804
SFV39154.1
Urea carboxylase.
  
 
 0.764
SFV38044.1
Allosteric NADP-dependent malic enzyme.
 
 
 0.748
SFV38518.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 0.664
SFV39096.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.556
SFV37669.1
Pyridoxine kinase.
       0.526
SFV38847.1
triphosphoribosyl-dephospho-CoA synthase.
  
  
 0.481
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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