STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV38134.1Putative oxidoreductase. (166 aa)    
Predicted Functional Partners:
SFV38136.1
Thiosulfate reductase cytochrome b subunit.
    
  0.794
SFV38135.1
Sulfoxide reductase catalytic subunit YedY.
  
 
  0.762
SFV30013.1
Cytochrome P460.
  
  
  0.568
SFV38137.1
Pentapeptide MXKDX repeat protein.
       0.492
SFV30018.1
3',5'-cyclic AMP phosphodiesterase CpdA.
  
     0.410
SFV25936.1
NADH dehydrogenase.
  
 
 0.404
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.