STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV38151.1Uncharacterized membrane protein YkoI. (110 aa)    
Predicted Functional Partners:
SFV38149.1
Signal transduction histidine kinase.
 
     0.945
SFV38150.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
    0.875
SFV37005.1
Signal transduction histidine kinase.
 
     0.736
SFV38154.1
Cytochrome b.
 
     0.632
SFV38152.1
Peptidase propeptide and YPEB domain-containing protein.
 
     0.583
SFV25723.1
Hypothetical protein.
  
     0.558
SFV26123.1
Hypothetical protein.
  
    0.439
SFV39012.1
Hypothetical protein.
  
     0.430
SFV35696.1
Hypothetical protein.
  
     0.422
SFV28675.1
Hypothetical protein.
  
     0.420
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.