STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV38176.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
SFV38178.1
TolB amino-terminal domain-containing protein.
 
    0.808
SFV38175.1
Hypothetical protein.
       0.773
SFV38113.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
     0.727
SFV38177.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
 
     0.703
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
   
    0.629
SFV26177.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
  
  
 0.553
SFV33006.1
Uncharacterized membrane protein.
  
     0.551
SFV28229.1
Fatty acid desaturase.
  
     0.540
SFV27321.1
Patatin-like phospholipase.
  
     0.481
SFV38189.1
SPW repeat-containing protein.
  
     0.478
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
Server load: medium (80%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.