STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV38838.1Methylene-tetrahydromethanopterin dehydrogenase. (301 aa)    
Predicted Functional Partners:
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.
 
  
 0.993
SFV38849.1
Formaldehyde activating enzyme.
 
  
 0.987
SFV29092.1
Formaldehyde-activating enzyme.
  
  
 0.978
SFV32873.1
Formaldehyde-activating enzyme.
  
  
 0.956
SFV38841.1
Predicted ATP-dependent carboligase, ATP-grasp superfamily.
 
  
  0.944
SFV38836.1
beta-RFAP synthase.
 
     0.939
SFV38847.1
triphosphoribosyl-dephospho-CoA synthase.
 
     0.932
SFV38845.1
alpha-L-glutamate ligase, RimK family; Belongs to the RimK family.
 
     0.928
SFV32842.1
Formaldehyde-activating enzyme.
  
  
 0.917
SFV38834.1
4a-hydroxytetrahydrobiopterin dehydratase.
 
     0.880
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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