STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV39183.1Putative phage cell wall peptidase, NlpC/P60 family. (145 aa)    
Predicted Functional Partners:
SFV39184.1
Phage conserved hypothetical protein BR0599.
 
     0.957
SFV39185.1
TIGR02217 family protein.
 
     0.957
SFV39186.1
Phage tail tape measure protein, lambda family.
 
  
 0.941
SFV39188.1
Phage tail tube protein, GTA-gp10; Partial gene; manually curated.
 
    0.929
SFV39182.1
Putative phage tail protein.
 
   
 0.899
SFV31874.1
Phage portal protein, HK97 family.
 
    0.817
SFV33504.1
Protein of unknown function.
 
  
 0.807
SFV31866.1
Prohead peptidase. Unknown type peptidase. MEROPS family U35.
 
     0.796
SFV31862.1
Phage major capsid protein, HK97 family.
 
     0.794
SFV31882.1
Large terminase phage packaging protein.
 
     0.791
Your Current Organism:
Hyphomicrobium facile
NCBI taxonomy Id: 51670
Other names: ATCC 27485, H. facile, Hyphomicrobium facilis, IFAM H-526
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