Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cpar_0100PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cte:CT2146 iron-sulfur cluster-binding protein. (662 aa)    
Predicted Functional Partners:
Cpar_0102
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: cte:CT2142 electron transfer flavoprotein, beta subunit.
 
  
 0.894
Cpar_0103
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: cte:CT2141 electron transfer flavoprotein, alpha subunit.
 
  
 0.879
Cpar_0101
Peptidase M24; PFAM: creatinase; peptidase M24; KEGG: cte:CT2145 peptidase, M24 family protein.
 
     0.755
Cpar_0104
PFAM: thioesterase superfamily protein; KEGG: cte:CT2140 hypothetical protein.
 
     0.591
Cpar_0099
KEGG: cte:CT2147 hypothetical protein.
       0.476
Cpar_0950
CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: cte:CT1245 heterodisulfide reductase, subunit C/succinate dehydrogenase, subunit C.
   
 
 0.452
Cpar_0560
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cte:CT1628 pyruvate flavodoxin/ferrodoxin oxidoreductase.
     
 0.447
Cpar_2025
PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cte:CT2266 succinate dehydrogenase, iron-sulfur protein.
  
   0.430
Your Current Organism:
Chlorobaculum parvum
NCBI taxonomy Id: 517417
Other names: C. parvum NCIB 8327, Chlorobaculum parvum NCIB 8327, Chlorobaculum parvum str. NCIB 8327, Chlorobaculum parvum strain NCIB 8327
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