STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpar_0416PFAM: protein of unknown function DUF477; KEGG: cch:Cag_1773 hypothetical protein. (238 aa)    
Predicted Functional Partners:
Cpar_0415
PFAM: LemA family protein; KEGG: cph:Cpha266_2022 LemA family protein.
 
    0.927
Cpar_0417
PFAM: protein of unknown function DUF477; KEGG: cph:Cpha266_2020 protein of unknown function DUF477.
 
     0.924
Cpar_0877
TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: eca:ECA1143 cytochrome o ubiquinol oxidase subunit II.
    
   0.811
Cpar_0878
KEGG: mes:Meso_3535 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I.
    
   0.811
Cpar_1734
PFAM: Cytochrome b/b6 domain; KEGG: cte:CT0303 cytochrome b-c complex, cytochrome b subunit.
    
   0.811
Cpar_0879
TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: aha:AHA_2944 cytochrome o ubiquinol oxidase subunit III.
    
   0.787
Cpar_1206
PFAM: protein of unknown function DUF477; KEGG: tde:TDE2528 hypothetical protein.
 
     0.686
Cpar_1713
PFAM: amine oxidase; Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: cte:CT0323 gamma-carotene desaturase.
   
   0.575
Cpar_1735
Plastoquinol--plastocyanin reductase; PFAM: Rieske [2Fe-2S] domain protein; KEGG: cte:CT0302 cytochrome b6-f complex, iron-sulfur subunit.
   
   0.575
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
  
    0.458
Your Current Organism:
Chlorobaculum parvum
NCBI taxonomy Id: 517417
Other names: C. parvum NCIB 8327, Chlorobaculum parvum NCIB 8327, Chlorobaculum parvum str. NCIB 8327, Chlorobaculum parvum strain NCIB 8327
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