STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpar_0763KEGG: cte:CT1400 hypothetical protein. (180 aa)    
Predicted Functional Partners:
Cpar_0764
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsq:Rsph17025_2416 hypothetical protein.
       0.615
Cpar_0604
KEGG: cte:CT0587 hypothetical protein.
  
 
 
 0.609
Cpar_1113
KEGG: cte:CT1169 hypothetical protein.
  
     0.568
Cpar_0344
KEGG: plt:Plut_0314 hypothetical protein.
  
     0.553
Cpar_1114
PFAM: cyclase/dehydrase; KEGG: cte:CT1170 hypothetical protein.
  
     0.543
Cpar_0652
PFAM: ferredoxin; KEGG: cte:CT0651 chlorosome envelope protein J.
  
    0.533
Cpar_0762
KEGG: cte:CT1401 hypothetical protein.
       0.520
Cpar_1826
KEGG: cte:CT0208 hypothetical protein.
  
     0.440
Cpar_0780
PFAM: ferredoxin; KEGG: cte:CT1382 chlorosome envelope protein I.
  
    0.438
Cpar_1556
KEGG: cte:CT1463 hypothetical protein.
  
     0.437
Your Current Organism:
Chlorobaculum parvum
NCBI taxonomy Id: 517417
Other names: C. parvum NCIB 8327, Chlorobaculum parvum NCIB 8327, Chlorobaculum parvum str. NCIB 8327, Chlorobaculum parvum strain NCIB 8327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.