STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpar_1159KEGG: cte:CT1219 hypothetical protein. (309 aa)    
Predicted Functional Partners:
Cpar_1624
KEGG: cte:CT1538 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; Belongs to the NifD/NifK/NifE/NifN family.
  
     0.570
Cpar_1623
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
  
     0.555
Cpar_1625
Nitrogenase; PFAM: oxidoreductase/nitrogenase component 1; KEGG: cte:CT1539 nitrogenase iron-molybdenum cofactor biosynthesis protein NifN, putative; Belongs to the NifD/NifK/NifE/NifN family.
  
     0.545
Cpar_1627
KEGG: cte:CT1541 ferredoxin, 2Fe-2S.
 
     0.529
Cpar_1622
KEGG: cte:CT1536 nitrogenase molybdenum-iron protein, alpha subunit; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1.
  
     0.511
Cpar_0032
KEGG: cte:CT2245 hypothetical protein.
  
     0.440
Cpar_1158
KEGG: cte:CT1218 hypothetical protein.
       0.432
Cpar_1154
PFAM: 5 nucleotidase deoxy cytosolic type C; KEGG: cte:CT1214 hypothetical protein.
  
     0.426
Cpar_0774
KEGG: cte:CT1389 hypothetical protein.
  
  
 0.411
Your Current Organism:
Chlorobaculum parvum
NCBI taxonomy Id: 517417
Other names: C. parvum NCIB 8327, Chlorobaculum parvum NCIB 8327, Chlorobaculum parvum str. NCIB 8327, Chlorobaculum parvum strain NCIB 8327
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