Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cpar_1925PFAM: protein of unknown function DUF156; KEGG: cte:CT2050 hypothetical protein. (76 aa)    
Predicted Functional Partners:
Cpar_1924
PFAM: outer membrane efflux protein; KEGG: cte:CT2049 LipD protein, putative.
       0.786
Cpar_1923
KEGG: pvi:Cvib_1643 hypothetical protein.
  
    0.745
Cpar_1920
PFAM: beta-lactamase domain protein; KEGG: cte:CT2045 hydroxyacylglutathione hydrolase, putative; Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.
     
 0.665
Cpar_1922
PFAM: acriflavin resistance protein; KEGG: pvi:Cvib_1642 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.656
Cpar_1921
KEGG: plt:Plut_1998 hypothetical protein.
       0.632
Cpar_1926
KEGG: cte:CT2051 hypothetical protein.
       0.401
Your Current Organism:
Chlorobaculum parvum
NCBI taxonomy Id: 517417
Other names: C. parvum NCIB 8327, Chlorobaculum parvum NCIB 8327, Chlorobaculum parvum str. NCIB 8327, Chlorobaculum parvum strain NCIB 8327
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