STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ctha_0347KEGG: cte:CT1891 hydrogenase/sulfur reductase, beta subunit. (352 aa)    
Predicted Functional Partners:
Ctha_0344
PFAM: nickel-dependent hydrogenase large subunit; KEGG: cte:CT1894 hydrogenase/sulfur reductase, alpha subunit.
 
  
 0.995
Ctha_0346
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: cch:Cag_1567 hydrogenase/sulfur reductase, gamma subunit.
  
 0.994
Ctha_0345
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: cph:Cpha266_2168 NADH ubiquinone oxidoreductase, 20 kDa subunit.
 
   
 0.953
Ctha_0643
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase flavin-binding; KEGG: cph:Cpha266_0032 sulfide dehydrogenase (flavocytochrome), flavoprotein subunit.
  
 
 0.914
Ctha_0644
PFAM: cytochrome c class I; KEGG: pvi:Cvib_0008 sulfide dehydrogenase (flavocytochrome), cytochrome c subunit.
    
 0.905
Ctha_1280
KEGG: ava:Ava_4077 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase.
   
 
  0.902
Ctha_1507
TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cte:CT0700 cysteine synthase.
     
 0.902
Ctha_0650
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsy:DSY4468 hypothetical protein.
   
 
  0.901
Ctha_1502
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aae:aq_788 putative NADH dehydrogenase.
   
 
  0.901
Ctha_2371
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: plt:Plut_0071 sulfide-quinone reductase, putative.
   
 
  0.901
Your Current Organism:
Chloroherpeton thalassium
NCBI taxonomy Id: 517418
Other names: C. thalassium ATCC 35110, Chloroherpeton thalassium ATCC 35110, Chloroherpeton thalassium str. ATCC 35110, Chloroherpeton thalassium strain ATCC 35110
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