STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ctha_0728Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pcr:Pcryo_2287 histidine kinase. (574 aa)    
Predicted Functional Partners:
Ctha_0727
PFAM: response regulator receiver; KEGG: par:Psyc_0720 probable response regulator receiver, fis type.
 
   0.906
Ctha_0895
PFAM: response regulator receiver; KEGG: par:Psyc_0720 probable response regulator receiver, fis type.
 
 
   0.788
Ctha_1705
PFAM: response regulator receiver; KEGG: par:Psyc_0720 probable response regulator receiver, fis type.
  
 
   0.787
Ctha_2625
PFAM: response regulator receiver; KEGG: pcr:Pcryo_2288 response regulator receiver domain protein (CheY-like).
     0.771
Ctha_1652
PFAM: response regulator receiver; KEGG: pcr:Pcryo_2288 response regulator receiver domain protein (CheY-like).
 
     0.767
Ctha_0605
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; Two component regulator propeller; Two component regulator three Y domain protein; KEGG: ana:all2875 two-component hybrid sensor and regulator.
 
 
 0.762
Ctha_2235
KEGG: gur:Gura_2743 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
0.750
Ctha_2355
CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: hch:HCH_00541 chemotaxis protein histidine kinase and related kinase.
 
 
 0.714
Ctha_0870
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_4375 ATP-binding region, ATPase-like.
 
 
   0.679
Ctha_2528
PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: aba:Acid345_0504 response regulator receiver modulated metal dependent phosphohydrolase.
 
 
 0.669
Your Current Organism:
Chloroherpeton thalassium
NCBI taxonomy Id: 517418
Other names: C. thalassium ATCC 35110, Chloroherpeton thalassium ATCC 35110, Chloroherpeton thalassium str. ATCC 35110, Chloroherpeton thalassium strain ATCC 35110
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