close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ctha_1663PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_0919 alpha/beta hydrolase fold. (339 aa)    
Predicted Functional Partners:
Ctha_1664
KEGG: gme:Gmet_0515 hypothetical protein.
       0.773
Ctha_2691
PFAM: alpha/beta hydrolase fold; KEGG: cch:Cag_1299 dihydrolipoamide acetyltransferase, putative.
  
     0.707
Ctha_1500
TIGRFAM: C-20 methyltransferase BchU; PFAM: O-methyltransferase family 2; KEGG: cte:CT0028 CrtF-related protein.
  
     0.644
Ctha_1120
PFAM: alpha/beta hydrolase fold; KEGG: plt:Plut_1944 proline iminopeptidase, putative.
  
     0.627
Ctha_0523
PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_2276 alpha/beta hydrolase fold.
  
     0.599
Ctha_1050
PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3202 AMP-dependent synthetase and ligase.
 
 
 0.556
Ctha_1259
PFAM: ferredoxin; KEGG: plt:Plut_0893 chlorosome envelope protein I.
  
  
 0.537
rimO
MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.479
Ctha_2097
KEGG: cph:Cpha266_1536 hypothetical protein.
  
     0.469
Ctha_0712
PFAM: pentapeptide repeat protein; KEGG: pmu:PM0591 hypothetical.
 
     0.440
Your Current Organism:
Chloroherpeton thalassium
NCBI taxonomy Id: 517418
Other names: C. thalassium ATCC 35110, Chloroherpeton thalassium ATCC 35110, Chloroherpeton thalassium str. ATCC 35110, Chloroherpeton thalassium strain ATCC 35110
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.