STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ctha_1771PFAM: GAF domain protein; KEGG: mgm:Mmc1_1857 metal dependent phosphohydrolase. (695 aa)    
Predicted Functional Partners:
Ctha_0500
Adenylate/guanylate cyclase with Chase sensor; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: sat:SYN_01481 adenylate cyclase.
 
     0.694
Ctha_0698
KEGG: hmo:HM1_1053 hypothetical protein.
  
     0.681
Ctha_2527
KEGG: dol:Dole_0327 exopolyphosphatase-related protein.
  
     0.645
Ctha_1481
Adenylate/guanylate cyclase with integral membrane sensor; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; KEGG: mgm:Mmc1_1583 adenylate/guanylate cyclase.
 
     0.628
Ctha_2189
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: pvi:Cvib_0875 diguanylate cyclase.
 
 
 0.556
Ctha_0491
Putative PAS/PAC sensor protein; KEGG: mhu:Mhun_1350 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
     0.539
Ctha_0802
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dar:Daro_1156 diguanylate cyclase with PAS/PAC sensor.
  
 
 0.535
Ctha_2616
Diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: aba:Acid345_0185 multi sensor diguanylate cyclase / metal dependent phosphohydrolase.
 
 
 0.517
Ctha_1772
PFAM: GAF domain protein; SMART: metal-dependent phosphohydrolase HD region; KEGG: aba:Acid345_4432 metal dependent phosphohydrolase.
 
   
0.509
Ctha_1770
TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: cte:CT2029 competence/damage-inducible protein CinA; Belongs to the CinA family.
       0.462
Your Current Organism:
Chloroherpeton thalassium
NCBI taxonomy Id: 517418
Other names: C. thalassium ATCC 35110, Chloroherpeton thalassium ATCC 35110, Chloroherpeton thalassium str. ATCC 35110, Chloroherpeton thalassium strain ATCC 35110
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