STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ctha_1948PFAM: glycosyl transferase group 1; KEGG: ppg:PputGB1_1385 glycosyl transferase group 1. (387 aa)    
Predicted Functional Partners:
Ctha_1947
PFAM: glycosyl transferase family 9; KEGG: mlo:mlr2566 ADP-heptose-LPS heptosyltransferase.
  
    0.672
Ctha_0364
KEGG: rrs:RoseRS_3578 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.572
Ctha_2716
PFAM: glycosyl transferase group 1; KEGG: bvu:BVU_3925 glycosyltransferase family 4.
  
     0.569
Ctha_0793
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ppd:Ppro_2450 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.553
Ctha_2479
PFAM: glycosyl transferase group 1; KEGG: pvi:Cvib_0692 glycosyl transferase, group 1.
  
     0.545
Ctha_0238
PFAM: glycosyl transferase group 1; KEGG: deb:DehaBAV1_0869 phosphatidylinositol alpha-mannosyltransferase.
  
     0.519
Ctha_0296
PFAM: glycosyl transferase group 1; KEGG: cch:Cag_1473 hypothetical protein.
  
     0.498
lpxC
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
     
 0.485
Ctha_0204
Nucleotide sugar dehydrogenase; KEGG: gur:Gura_2308 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase.
 
  
 0.455
Ctha_0535
PFAM: glycosyl transferase group 1; KEGG: pfu:PF1358 glycosyl transferase.
  
     0.447
Your Current Organism:
Chloroherpeton thalassium
NCBI taxonomy Id: 517418
Other names: C. thalassium ATCC 35110, Chloroherpeton thalassium ATCC 35110, Chloroherpeton thalassium str. ATCC 35110, Chloroherpeton thalassium strain ATCC 35110
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