STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ctha_2141PFAM: glycosyl transferase family 2; KEGG: bth:BT_3372 glycosyltransferase. (303 aa)    
Predicted Functional Partners:
Ctha_2138
PFAM: acylneuraminate cytidylyltransferase; KEGG: xcv:XCV2003 3-deoxy-manno-octulosonate cytidylyltransferase.
     
 0.712
Ctha_2139
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mbu:Mbur_1599 haloacid dehalogenase-like hydrolase.
       0.709
Ctha_2140
Hypothetical protein; KEGG: bav:BAV1252 O antigen biosynthesis sulfotransferase.
       0.709
Ctha_2133
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bfr:BF2581 aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.702
Ctha_2142
Hypothetical protein.
       0.636
Ctha_2143
Hypothetical protein; KEGG: pmu:PM1005 unknown.
       0.636
Ctha_2136
KEGG: lbl:LBL_1205 hypothetical protein.
  
    0.602
Ctha_2137
PFAM: pyruvate carboxyltransferase; KEGG: bvu:BVU_2661 putative aldolase.
       0.594
Ctha_2512
PFAM: glycosyl transferase family 2; KEGG: gur:Gura_3806 glycosyl transferase, family 2.
  
     0.584
Ctha_2513
KEGG: sat:SYN_00822 glycosyltransferase involved in cell wall biogenesis.
  
     0.575
Your Current Organism:
Chloroherpeton thalassium
NCBI taxonomy Id: 517418
Other names: C. thalassium ATCC 35110, Chloroherpeton thalassium ATCC 35110, Chloroherpeton thalassium str. ATCC 35110, Chloroherpeton thalassium strain ATCC 35110
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