STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ctha_2239PFAM: DNA methylase N-4/N-6 domain protein; KEGG: pth:PTH_2144 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (328 aa)    
Predicted Functional Partners:
Ctha_1054
TIGRFAM: DNA binding domain protein, excisionase family; PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mae:Maeo_0192 DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.726
Ctha_0902
KEGG: cth:Cthe_1513 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase.
 
  
 0.696
Ctha_2238
PFAM: peptidase M61 domain protein; KEGG: ccr:CC_2539 hypothetical protein.
       0.671
Ctha_2494
KEGG: mar:MAE_58720 hypothetical protein.
 
     0.641
Ctha_2240
KEGG: hac:Hac_1347 hypothetical protein.
       0.572
Ctha_2248
KEGG: cch:Cag_0820 hypothetical protein.
  
     0.485
Your Current Organism:
Chloroherpeton thalassium
NCBI taxonomy Id: 517418
Other names: C. thalassium ATCC 35110, Chloroherpeton thalassium ATCC 35110, Chloroherpeton thalassium str. ATCC 35110, Chloroherpeton thalassium strain ATCC 35110
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