STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ctha_2595PFAM: von Willebrand factor type A; KEGG: bfs:BF2500 aerotolerance-related membrane protein. (346 aa)    
Predicted Functional Partners:
Ctha_2594
KEGG: pdi:BDI_0950 conserved hypothetical protein BatC.
     0.975
Ctha_2592
KEGG: pdi:BDI_0951 conserved hypothetical protein BatD.
 
   
 0.854
Ctha_2591
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: SH3 domain protein; Tetratricopeptide domain protein; KEGG: fjo:Fjoh_0723 TPR repeat-containing protein.
 
   
 0.825
Ctha_0412
PFAM: protein of unknown function DUF58; SMART: von Willebrand factor type A; KEGG: gfo:GFO_3411 hypothetical protein.
 
  
 0.794
Ctha_2438
PFAM: protein of unknown function DUF58; KEGG: sru:SRU_1336 protein of unknown function family.
 
  
 0.754
Ctha_0411
KEGG: hau:Haur_4902 hypothetical protein.
 
     0.703
Ctha_0694
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: sru:SRU_2170 ATPase family associated with various cellular activities (AAA), putative.
 
  
 0.659
Ctha_2596
PFAM: protein of unknown function DUF45; KEGG: plt:Plut_0661 zinc protease, putative.
       0.437
Your Current Organism:
Chloroherpeton thalassium
NCBI taxonomy Id: 517418
Other names: C. thalassium ATCC 35110, Chloroherpeton thalassium ATCC 35110, Chloroherpeton thalassium str. ATCC 35110, Chloroherpeton thalassium strain ATCC 35110
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