STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ctha_2691PFAM: alpha/beta hydrolase fold; KEGG: cch:Cag_1299 dihydrolipoamide acetyltransferase, putative. (296 aa)    
Predicted Functional Partners:
Ctha_1663
PFAM: alpha/beta hydrolase fold; KEGG: cph:Cpha266_0919 alpha/beta hydrolase fold.
  
     0.707
Ctha_1120
PFAM: alpha/beta hydrolase fold; KEGG: plt:Plut_1944 proline iminopeptidase, putative.
  
     0.655
Ctha_1050
PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3202 AMP-dependent synthetase and ligase.
 
 
 0.564
Ctha_0606
KEGG: cch:Cag_0034 hypothetical protein.
  
     0.545
Ctha_0083
KEGG: cph:Cpha266_0474 hypothetical protein.
  
    0.523
Ctha_2097
KEGG: cph:Cpha266_1536 hypothetical protein.
  
     0.519
Ctha_1262
PFAM: FAD dependent oxidoreductase; KEGG: cph:Cpha266_0874 amine oxidase.
  
    0.517
Ctha_1159
Carotene 7,8-desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cph:Cpha266_1173 zeta-carotene desaturase.
  
     0.483
Ctha_1697
Carotene 7,8-desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cte:CT1414 zeta-carotene desaturase.
  
     0.482
Ctha_2570
PFAM: ferrochelatase; KEGG: plt:Plut_0740 ferrochelatase, putative; Belongs to the ferrochelatase family.
  
     0.451
Your Current Organism:
Chloroherpeton thalassium
NCBI taxonomy Id: 517418
Other names: C. thalassium ATCC 35110, Chloroherpeton thalassium ATCC 35110, Chloroherpeton thalassium str. ATCC 35110, Chloroherpeton thalassium strain ATCC 35110
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