Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC32816.1 | SFC32848.1 | SAMN05421762_0562 | SAMN05421762_0563 | Membrane protein. | Phospholipase_D-nuclease N-terminal. | 0.491 |
SFC32816.1 | SFC39291.1 | SAMN05421762_0562 | SAMN05421762_0778 | Membrane protein. | Hypothetical protein. | 0.603 |
SFC32816.1 | SFC71137.1 | SAMN05421762_0562 | SAMN05421762_1899 | Membrane protein. | Protease I. | 0.433 |
SFC32816.1 | SFC75622.1 | SAMN05421762_0562 | SAMN05421762_2088 | Membrane protein. | Osmotically inducible protein OsmC. | 0.407 |
SFC32816.1 | SFC87412.1 | SAMN05421762_0562 | SAMN05421762_2533 | Membrane protein. | General stress protein 26. | 0.455 |
SFC32848.1 | SFC32816.1 | SAMN05421762_0563 | SAMN05421762_0562 | Phospholipase_D-nuclease N-terminal. | Membrane protein. | 0.491 |
SFC39291.1 | SFC32816.1 | SAMN05421762_0778 | SAMN05421762_0562 | Hypothetical protein. | Membrane protein. | 0.603 |
SFC71137.1 | SFC32816.1 | SAMN05421762_1899 | SAMN05421762_0562 | Protease I. | Membrane protein. | 0.433 |
SFC71137.1 | SFC75622.1 | SAMN05421762_1899 | SAMN05421762_2088 | Protease I. | Osmotically inducible protein OsmC. | 0.542 |
SFC71137.1 | SFC87412.1 | SAMN05421762_1899 | SAMN05421762_2533 | Protease I. | General stress protein 26. | 0.618 |
SFC75622.1 | SFC32816.1 | SAMN05421762_2088 | SAMN05421762_0562 | Osmotically inducible protein OsmC. | Membrane protein. | 0.407 |
SFC75622.1 | SFC71137.1 | SAMN05421762_2088 | SAMN05421762_1899 | Osmotically inducible protein OsmC. | Protease I. | 0.542 |
SFC87412.1 | SFC32816.1 | SAMN05421762_2533 | SAMN05421762_0562 | General stress protein 26. | Membrane protein. | 0.455 |
SFC87412.1 | SFC71137.1 | SAMN05421762_2533 | SAMN05421762_1899 | General stress protein 26. | Protease I. | 0.618 |